Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.55■□□□□ 0.24
O00370 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
O00370 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
O00370 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
O00370 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
O00370 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.55■□□□□ 0.24
O00370 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
O00370 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.55■□□□□ 0.24
O00370 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.55■□□□□ 0.24
O00370 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
O00370 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
O00370 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
O00370 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.55■□□□□ 0.24
O00370 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.55■□□□□ 0.24
O00370 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
O00370 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
O00370 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.54■□□□□ 0.24
O00370 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
O00370 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
O00370 SLC7A15P-201ENST00000424028 1363 ntBASIC16.54■□□□□ 0.24
O00370 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
O00370 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.54■□□□□ 0.24
O00370 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
O00370 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.54■□□□□ 0.24
O00370 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.54■□□□□ 0.24
O00370 DFFBP1-201ENST00000433250 979 ntBASIC16.54■□□□□ 0.24
O00370 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.54■□□□□ 0.24
O00370 AC055876.2-201ENST00000531834 546 ntBASIC16.54■□□□□ 0.24
O00370 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.54■□□□□ 0.24
O00370 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.54■□□□□ 0.24
O00370 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.54■□□□□ 0.24
O00370 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.54■□□□□ 0.24
O00370 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.54■□□□□ 0.24
O00370 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.54■□□□□ 0.24
O00370 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.54■□□□□ 0.24
O00370 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.54■□□□□ 0.24
O00370 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.54■□□□□ 0.24
O00370 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.54■□□□□ 0.24
O00370 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.54■□□□□ 0.24
O00370 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
O00370 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
O00370 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
O00370 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.53■□□□□ 0.24
O00370 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
O00370 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
O00370 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.53■□□□□ 0.24
O00370 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.53■□□□□ 0.24
O00370 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
O00370 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.53■□□□□ 0.24
O00370 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.53■□□□□ 0.24
O00370 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
O00370 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.53■□□□□ 0.24
O00370 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.53■□□□□ 0.24
O00370 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.53■□□□□ 0.24
O00370 RRP7BP-205ENST00000566851 833 ntBASIC16.53■□□□□ 0.24
O00370 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.53■□□□□ 0.24
O00370 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 AL132655.2-201ENST00000596276 594 ntBASIC16.53■□□□□ 0.24
O00370 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.53■□□□□ 0.24
O00370 AC004233.3-201ENST00000607794 1269 ntBASIC16.53■□□□□ 0.24
O00370 AC099568.2-201ENST00000609194 695 ntBASIC16.53■□□□□ 0.24
O00370 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
O00370 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.53■□□□□ 0.24
O00370 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.53■□□□□ 0.24
O00370 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
O00370 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
O00370 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
O00370 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms