Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.7□□□□□ -0.22
NPIPB4C9JG80 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.7□□□□□ -0.22
NPIPB4C9JG80 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NPIPB4C9JG80 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AL390755.1-201ENST00000623716 2027 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AL360270.3-201ENST00000609118 1348 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AL353779.1-201ENST00000434793 351 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AL589987.1-201ENST00000453380 819 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AC092183.1-201ENST00000469884 875 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 RN7SL399P-201ENST00000471648 279 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AC093004.1-201ENST00000508850 424 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 DOC2GP-202ENST00000514950 1163 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 RNA5SP421-201ENST00000516864 134 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 AC007292.2-201ENST00000593524 1812 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 CICP23-201ENST00000605013 2741 ntBASIC13.69□□□□□ -0.22
NPIPB4C9JG80 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NPIPB4C9JG80 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.68□□□□□ -0.22
NPIPB4C9JG80 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms