Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 PRAL-201ENST00000624952 3286 ntBASIC13.5□□□□□ -0.25
MBD3L3A6NE82 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 AC090616.6-203ENST00000579186 1945 ntBASIC13.5□□□□□ -0.25
MBD3L3A6NE82 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MBD3L3A6NE82 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AC006033.1-201ENST00000440505 426 ntBASIC13.49□□□□□ -0.25
MBD3L3A6NE82 MTX1P1-201ENST00000440904 838 ntBASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 AC055811.4-201ENST00000624039 1754 ntBASIC13.49□□□□□ -0.25
MBD3L3A6NE82 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 PCDHA1-201ENST00000378133 2726 ntBASIC13.49□□□□□ -0.25
MBD3L3A6NE82 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
MBD3L3A6NE82 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MBD3L3A6NE82 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms