Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 MKNK2P1-201ENST00000437526 628 ntBASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV6-7A0A0A0MS04 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC079781.5-202ENST00000641784 3743 ntBASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 WASH3P-207ENST00000560956 1394 ntBASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 FO538757.1-201ENST00000623083 1397 ntBASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 FO393414.2-201ENST00000405153 598 ntBASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 AL353705.2-201ENST00000428243 662 ntBASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRBV6-7A0A0A0MS04 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms