Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 MEP1AP4-201ENST00000423244 1087 ntBASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AL606495.2-201ENST00000605867 535 ntBASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AC099568.2-201ENST00000609194 695 ntBASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 AL109954.1-202ENST00000564051 2148 ntBASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHB1Q9Y5F3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 RPL13P2-201ENST00000440687 659 ntBASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 AC093726.1-201ENST00000608064 963 ntBASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 WFDC1-204ENST00000613603 549 ntBASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 MIR6775-201ENST00000617557 69 ntBASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHB1Q9Y5F3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 REXO1L6P-201ENST00000603433 1515 ntBASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 C18orf15-201ENST00000623680 2534 ntBASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 AC023157.3-201ENST00000619086 2088 ntBASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHB1Q9Y5F3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms