Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 MIR1233-2-201ENST00000408138 82 ntBASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 MIR1233-1-201ENST00000408722 82 ntBASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 GPS2P2-201ENST00000430745 888 ntBASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 AC134684.3-201ENST00000641758 218 ntBASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR1DQ9Y2S0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 AC009090.5-201ENST00000624886 2285 ntBASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 RN7SL828P-201ENST00000607615 303 ntBASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 AL589739.1-201ENST00000607720 493 ntBASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 AC079781.4-201ENST00000641908 219 ntBASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
POLR1DQ9Y2S0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms