Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AL023775.1-201ENST00000454907 1746 ntBASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 FGFR3P6-201ENST00000457012 610 ntBASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AC136632.2-201ENST00000512891 861 ntBASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AL732292.2-201ENST00000609649 430 ntBASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AP000550.4-202ENST00000639755 178 ntBASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AL645728.2-201ENST00000641974 660 ntBASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.25□□□□□ -0.13
ERGIC3Q9Y282 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 MRPL20P1-201ENST00000400819 433 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 IGHV3-65-201ENST00000523210 341 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AL031432.2-201ENST00000566714 459 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AL928711.1-201ENST00000570165 459 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AC025062.2-201ENST00000605477 670 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AL445228.2-201ENST00000605589 952 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AC008608.2-201ENST00000606089 416 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 NPAP1P7-201ENST00000613027 823 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AC107918.4-202ENST00000641623 219 ntBASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ERGIC3Q9Y282 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms