Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 BNIP3P1-202ENST00000550043 1585 ntBASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 AC138035.3-201ENST00000622706 2791 ntBASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.99■□□□□ 0.79
PDZRN3Q9UPQ7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 TDH-203ENST00000531764 1110 ntBASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 AP000812.2-201ENST00000538934 718 ntBASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 BRI3BPP1-201ENST00000594224 787 ntBASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 GPR182-203ENST00000622922 591 ntBASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 AL691432.1-201ENST00000596308 1422 ntBASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 AC087481.3-201ENST00000602886 1894 ntBASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDZRN3Q9UPQ7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 PFN1P12-201ENST00000455938 534 ntBASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 PTP4A1P2-201ENST00000546033 454 ntBASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 AC079316.1-201ENST00000548397 411 ntBASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 AL158212.4-201ENST00000624062 1286 ntBASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDZRN3Q9UPQ7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms