Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KLHL28Q9NXS3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.58□□□□□ -0.08
KLHL28Q9NXS3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KLHL28Q9NXS3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.58□□□□□ -0.08
KLHL28Q9NXS3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.58□□□□□ -0.08
KLHL28Q9NXS3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.58□□□□□ -0.08
KLHL28Q9NXS3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 TNRC18P2-201ENST00000417666 2714 ntBASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 AC009090.5-201ENST00000624886 2285 ntBASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 AC107890.1-201ENST00000422478 521 ntBASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 ALG1L8P-201ENST00000533887 760 ntBASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 AL512356.2-201ENST00000546955 174 ntBASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 MIR6080-201ENST00000617359 66 ntBASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.57□□□□□ -0.08
KLHL28Q9NXS3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC099063.4-201ENST00000641099 1602 ntBASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC136604.1-201ENST00000418535 575 ntBASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 SPDYE14P-201ENST00000442619 822 ntBASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 RNA5SP421-201ENST00000516864 134 ntBASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC051619.7-201ENST00000568314 623 ntBASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 MIR4745-201ENST00000577608 62 ntBASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 AC018529.1-201ENST00000613063 361 ntBASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KLHL28Q9NXS3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.55□□□□□ -0.08
KLHL28Q9NXS3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
KLHL28Q9NXS3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.55□□□□□ -0.08
KLHL28Q9NXS3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.55□□□□□ -0.08
KLHL28Q9NXS3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
KLHL28Q9NXS3 AC148477.4-201ENST00000613430 1793 ntBASIC14.55□□□□□ -0.08
KLHL28Q9NXS3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms