Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AJ011931.1-201ENST00000618749 2492 ntBASIC15.52■□□□□ 0.08
MRM3Q9HC36 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 MEIS3P1-201ENST00000495167 958 ntBASIC15.52■□□□□ 0.08
MRM3Q9HC36 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 AC009407.1-201ENST00000568958 598 ntBASIC15.52■□□□□ 0.08
MRM3Q9HC36 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 MIR3197-201ENST00000582241 73 ntBASIC15.52■□□□□ 0.08
MRM3Q9HC36 AC092364.2-202ENST00000597012 1073 ntBASIC15.52■□□□□ 0.08
MRM3Q9HC36 AL158212.4-201ENST00000624062 1286 ntBASIC15.52■□□□□ 0.08
MRM3Q9HC36 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MRM3Q9HC36 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
MRM3Q9HC36 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.52■□□□□ 0.07
MRM3Q9HC36 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 REXO1L4P-201ENST00000605109 1937 ntBASIC15.52■□□□□ 0.07
MRM3Q9HC36 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
MRM3Q9HC36 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.52■□□□□ 0.07
MRM3Q9HC36 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.52■□□□□ 0.07
MRM3Q9HC36 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.52■□□□□ 0.07
MRM3Q9HC36 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 CICP23-201ENST00000605013 2741 ntBASIC15.52■□□□□ 0.07
MRM3Q9HC36 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MRM3Q9HC36 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 FGD5P1-202ENST00000614866 2498 ntBASIC15.51■□□□□ 0.07
MRM3Q9HC36 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 IGHV3-42-201ENST00000520410 361 ntBASIC15.51■□□□□ 0.07
MRM3Q9HC36 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 DUX4L27-201ENST00000554796 1261 ntBASIC15.51■□□□□ 0.07
MRM3Q9HC36 SPCS2P1-201ENST00000561636 679 ntBASIC15.51■□□□□ 0.07
MRM3Q9HC36 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MRM3Q9HC36 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MRM3Q9HC36 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MRM3Q9HC36 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRM3Q9HC36 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms