Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 MIR4683-201ENST00000579659 81 ntBASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 AC011247.3-201ENST00000603297 438 ntBASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CSMD1Q96PZ7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AL357563.1-201ENST00000404728 395 ntBASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AL592424.1-201ENST00000563624 1536 ntBASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 RCC2P8-201ENST00000502779 1035 ntBASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AC124067.4-201ENST00000519691 2379 ntBASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AC073150.1-201ENST00000450406 1084 ntBASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 PTPN20CP-201ENST00000614090 920 ntBASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AL132780.4-201ENST00000624870 1135 ntBASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD1Q96PZ7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC018463.1-201ENST00000456674 917 ntBASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC100850.1-201ENST00000506768 649 ntBASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 SNORD3B-2-202ENST00000571722 791 ntBASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 TPM3P8-201ENST00000330554 643 ntBASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 SERBP1P2-201ENST00000436888 1164 ntBASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AL353637.1-201ENST00000451571 732 ntBASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 AC103810.10-201ENST00000606504 343 ntBASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD1Q96PZ7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms