Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
RNF183Q96D59 AP005018.1-201ENST00000525475 301 ntBASIC11.62□□□□□ -0.55
RNF183Q96D59 TIMM17BP1-201ENST00000545713 516 ntBASIC11.62□□□□□ -0.55
RNF183Q96D59 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
RNF183Q96D59 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
RNF183Q96D59 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.62□□□□□ -0.55
RNF183Q96D59 TP53TG3HP-202ENST00000569755 579 ntBASIC11.62□□□□□ -0.55
RNF183Q96D59 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.62□□□□□ -0.55
RNF183Q96D59 AC140912.1-201ENST00000577171 1054 ntBASIC11.62□□□□□ -0.55
RNF183Q96D59 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.62□□□□□ -0.55
RNF183Q96D59 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.62□□□□□ -0.55
RNF183Q96D59 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.62□□□□□ -0.55
RNF183Q96D59 AL035252.4-201ENST00000624174 288 ntBASIC11.62□□□□□ -0.55
RNF183Q96D59 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.62□□□□□ -0.55
RNF183Q96D59 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.62□□□□□ -0.55
RNF183Q96D59 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 AP001282.1-201ENST00000531301 1499 ntBASIC11.62□□□□□ -0.55
RNF183Q96D59 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
RNF183Q96D59 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.62□□□□□ -0.55
RNF183Q96D59 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RNF183Q96D59 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.62□□□□□ -0.55
RNF183Q96D59 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.62□□□□□ -0.55
RNF183Q96D59 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.61□□□□□ -0.55
RNF183Q96D59 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.61□□□□□ -0.55
RNF183Q96D59 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RNF183Q96D59 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 HAUS4P1-201ENST00000406739 1145 ntBASIC11.61□□□□□ -0.55
RNF183Q96D59 EEF1DP4-201ENST00000446006 880 ntBASIC11.61□□□□□ -0.55
RNF183Q96D59 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.61□□□□□ -0.55
RNF183Q96D59 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 API5-211ENST00000534695 560 ntTSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.61□□□□□ -0.55
RNF183Q96D59 AC025048.3-201ENST00000590609 569 ntBASIC11.61□□□□□ -0.55
RNF183Q96D59 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 AC005702.4-201ENST00000618393 416 ntBASIC11.61□□□□□ -0.55
RNF183Q96D59 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.61□□□□□ -0.55
RNF183Q96D59 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RNF183Q96D59 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RNF183Q96D59 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RNF183Q96D59 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF183Q96D59 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RNF183Q96D59 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RNF183Q96D59 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms