Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APH1AQ96BI3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 BRI3BPP1-201ENST00000594224 787 ntBASIC13.77□□□□□ -0.21
APH1AQ96BI3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APH1AQ96BI3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APH1AQ96BI3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APH1AQ96BI3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APH1AQ96BI3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APH1AQ96BI3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APH1AQ96BI3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.77□□□□□ -0.21
APH1AQ96BI3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 INTS4P2-202ENST00000614726 2019 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 RPL5P21-201ENST00000404620 815 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 VDAC1P7-201ENST00000462417 847 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 AC011495.1-201ENST00000498085 584 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 AP005018.1-201ENST00000525475 301 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 HYMAI-201ENST00000635591 3347 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 LINC00554-201ENST00000564841 3011 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
APH1AQ96BI3 AC087481.3-201ENST00000602886 1894 ntBASIC13.76□□□□□ -0.21
APH1AQ96BI3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
APH1AQ96BI3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APH1AQ96BI3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.75□□□□□ -0.21
APH1AQ96BI3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms