Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL513190.1-201ENST00000621254 727 ntBASIC13.84□□□□□ -0.19
RFT1Q96AA3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RFT1Q96AA3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.84□□□□□ -0.19
RFT1Q96AA3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RFT1Q96AA3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RFT1Q96AA3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.83□□□□□ -0.19
RFT1Q96AA3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RFT1Q96AA3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
RFT1Q96AA3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RFT1Q96AA3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
RFT1Q96AA3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.83□□□□□ -0.19
RFT1Q96AA3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
RFT1Q96AA3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 AC010327.5-201ENST00000586923 3061 ntBASIC13.83□□□□□ -0.2
RFT1Q96AA3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.83□□□□□ -0.2
RFT1Q96AA3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 MIR4321-201ENST00000592276 80 ntBASIC13.83□□□□□ -0.2
RFT1Q96AA3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 BEND3P1-201ENST00000421591 1944 ntBASIC13.83□□□□□ -0.2
RFT1Q96AA3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.83□□□□□ -0.2
RFT1Q96AA3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 AC005252.3-201ENST00000623855 2258 ntBASIC13.83□□□□□ -0.2
RFT1Q96AA3 AC009090.5-201ENST00000624886 2285 ntBASIC13.83□□□□□ -0.2
RFT1Q96AA3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RFT1Q96AA3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.83□□□□□ -0.2
RFT1Q96AA3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.82□□□□□ -0.2
RFT1Q96AA3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFT1Q96AA3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.82□□□□□ -0.2
RFT1Q96AA3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms