Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC148477.4-201ENST00000613430 1793 ntBASIC13.53□□□□□ -0.24
CCDC107Q8WV48 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC107Q8WV48 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC107Q8WV48 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC107Q8WV48 AJ011931.1-201ENST00000618749 2492 ntBASIC13.52□□□□□ -0.24
CCDC107Q8WV48 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC107Q8WV48 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC107Q8WV48 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC107Q8WV48 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC107Q8WV48 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC107Q8WV48 AL731571.1-201ENST00000617058 5428 ntBASIC13.52□□□□□ -0.24
CCDC107Q8WV48 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AC002056.1-201ENST00000395613 760 ntBASIC13.52□□□□□ -0.25
CCDC107Q8WV48 MIR940-201ENST00000401276 94 ntBASIC13.52□□□□□ -0.25
CCDC107Q8WV48 MED15P5-201ENST00000423150 992 ntBASIC13.52□□□□□ -0.25
CCDC107Q8WV48 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 KRT18P3-201ENST00000451602 1288 ntBASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AC245100.5-201ENST00000452108 331 ntBASIC13.52□□□□□ -0.25
CCDC107Q8WV48 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AP002472.1-201ENST00000577490 586 ntBASIC13.52□□□□□ -0.25
CCDC107Q8WV48 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AC140113.2-201ENST00000604370 208 ntBASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CCDC107Q8WV48 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 FDX1P1-201ENST00000449115 551 ntBASIC13.51□□□□□ -0.25
CCDC107Q8WV48 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AC112191.1-201ENST00000523689 701 ntBASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 AC002347.1-201ENST00000569543 541 ntBASIC13.51□□□□□ -0.25
CCDC107Q8WV48 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC107Q8WV48 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms