Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 TOMM22P5-201ENST00000416399 439 ntBASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 AC093004.1-201ENST00000508850 424 ntBASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 ZBED1P1-201ENST00000502364 1930 ntBASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 AL133267.1-201ENST00000398220 340 ntBASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 DFFBP1-201ENST00000433250 979 ntBASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 AL353779.1-201ENST00000434793 351 ntBASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 AC092337.1-201ENST00000568699 1129 ntBASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 AL662799.1-202ENST00000614205 422 ntBASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 AC099063.4-201ENST00000641099 1602 ntBASIC18.16■□□□□ 0.5
SMARCC2Q8TAQ2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 GHSR-202ENST00000427970 912 ntBASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 AC027307.3-201ENST00000594262 1100 ntBASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms