Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 RARRES2P5-201ENST00000564013 466 ntBASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AC006449.6-201ENST00000612330 2296 ntBASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDND2Q8NHS1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 CLK3P2-201ENST00000427566 1453 ntBASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 ATP5G2P4-201ENST00000442175 420 ntBASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 RN7SL837P-201ENST00000463010 287 ntBASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AC104596.2-201ENST00000512793 793 ntBASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AL359881.2-201ENST00000602973 570 ntBASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDND2Q8NHS1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms