Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 MIR1202-201ENST00000408529 83 ntBASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 MIR4741-201ENST00000579822 90 ntBASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AC104982.3-201ENST00000581995 514 ntBASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 RN7SL190P-201ENST00000582519 257 ntBASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AC020914.3-201ENST00000594712 304 ntBASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AC005695.3-201ENST00000614522 232 ntBASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 AC011270.2-201ENST00000624293 2550 ntBASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.73■□□□□ 0.11
SYNPOQ8N3V7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 BX284668.4-201ENST00000453917 508 ntBASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 IGHJ2P-201ENST00000454480 60 ntBASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 RNA5SP423-201ENST00000517127 109 ntBASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AL596087.1-201ENST00000400979 1969 ntBASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
SYNPOQ8N3V7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms