Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AC134915.1-201ENST00000426461 574 ntBASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AC120045.2-201ENST00000567334 178 ntBASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 MIR6799-201ENST00000620297 69 ntBASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AL033527.4-201ENST00000641026 673 ntBASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AC069224.1-201ENST00000566372 1715 ntBASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PHTF2Q8N3S3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 AC018892.3-201ENST00000623986 2499 ntBASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 MIR648-201ENST00000385046 94 ntBASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 VDAC1P7-201ENST00000462417 847 ntBASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 CLUHP6-201ENST00000580789 941 ntBASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PHTF2Q8N3S3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 AL121723.1-201ENST00000445194 1519 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 PDIA3P1-201ENST00000471856 1510 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms