Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 MIR648-201ENST00000385046 94 ntBASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AL662890.1-201ENST00000396818 632 ntBASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 CNN2P10-201ENST00000443067 918 ntBASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AC114812.1-204ENST00000449669 728 ntBASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AL451050.2-201ENST00000606967 682 ntBASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AC011477.6-201ENST00000604980 1927 ntBASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMEFF1Q8IYR6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 AC148477.4-201ENST00000613430 1793 ntBASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 EIF4HP1-201ENST00000453115 687 ntBASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 AC016629.1-201ENST00000596579 586 ntBASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEFF1Q8IYR6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEFF1Q8IYR6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TMEFF1Q8IYR6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEFF1Q8IYR6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEFF1Q8IYR6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEFF1Q8IYR6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEFF1Q8IYR6 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms