Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C9orf40Q8IXQ3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C9orf40Q8IXQ3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C9orf40Q8IXQ3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C9orf40Q8IXQ3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
C9orf40Q8IXQ3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
C9orf40Q8IXQ3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 AC013268.4-201ENST00000637413 2228 ntBASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 AC093525.8-201ENST00000624099 1342 ntBASIC14.27□□□□□ -0.12
C9orf40Q8IXQ3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 GHSR-202ENST00000427970 912 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 TTTY23B-201ENST00000442790 549 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 AC007389.4-201ENST00000454674 793 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 GIMAP3P-201ENST00000495150 836 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 SAMD11P1-201ENST00000571429 661 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 MIR5189-201ENST00000577370 114 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 AC023024.2-201ENST00000623561 1993 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 AC148477.4-201ENST00000613430 1793 ntBASIC14.27□□□□□ -0.13
C9orf40Q8IXQ3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC007787.1-201ENST00000588095 1583 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC126365.1-201ENST00000578585 1514 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC104457.1-201ENST00000401024 814 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC004066.1-201ENST00000502488 802 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AP001063.1-201ENST00000568332 529 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 BX539320.1-201ENST00000623759 877 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC022532.1-201ENST00000624563 1728 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AC138035.3-201ENST00000622706 2791 ntBASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms