Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 AC233702.3-201ENST00000578656 1387 ntBASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 AK4P3-201ENST00000418260 669 ntBASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 LINC01023-201ENST00000606054 436 ntBASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 AC005363.2-201ENST00000618631 242 ntBASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 AL589182.2-201ENST00000619332 1049 ntBASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
CROCCP3Q8IVE0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 BNIP3P1-202ENST00000550043 1585 ntBASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CROCCP3Q8IVE0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CROCCP3Q8IVE0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms