Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CNN2P2-201ENST00000443536 909 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CNN2P3-201ENST00000450201 906 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 AC125807.1-201ENST00000483097 614 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 AC004449.1-201ENST00000564240 433 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 AL691403.2-201ENST00000618460 490 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 AL136317.3-201ENST00000618497 906 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 AC099063.4-201ENST00000641099 1602 ntBASIC14.39□□□□□ -0.11
VRK2Q86Y07 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.39□□□□□ -0.11
VRK2Q86Y07 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VRK2Q86Y07 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC010336.2-201ENST00000564226 506 ntBASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC051619.7-201ENST00000568314 623 ntBASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC015910.1-201ENST00000579400 975 ntBASIC14.38□□□□□ -0.11
VRK2Q86Y07 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC073592.8-201ENST00000624126 511 ntBASIC14.38□□□□□ -0.11
VRK2Q86Y07 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ZBED1P1-201ENST00000502364 1930 ntBASIC14.38□□□□□ -0.11
VRK2Q86Y07 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 MROH4P-201ENST00000431302 1578 ntBASIC14.38□□□□□ -0.11
VRK2Q86Y07 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.38□□□□□ -0.11
VRK2Q86Y07 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VRK2Q86Y07 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.37□□□□□ -0.11
VRK2Q86Y07 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VRK2Q86Y07 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.37□□□□□ -0.11
VRK2Q86Y07 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.37□□□□□ -0.11
VRK2Q86Y07 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VRK2Q86Y07 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.37□□□□□ -0.11
VRK2Q86Y07 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms