Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 CICP14-201ENST00000629111 2732 ntBASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
C11orf88Q6PI97 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 REXO1L1P-201ENST00000379010 6598 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC091951.1-201ENST00000512854 2465 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC005840.4-201ENST00000541242 2494 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC211486.1-202ENST00000416371 468 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 MKNK2P1-201ENST00000437526 628 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC108073.2-201ENST00000464002 357 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC112482.1-201ENST00000492080 688 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC211476.1-201ENST00000503899 468 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC005829.1-201ENST00000570002 483 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 MIR4492-201ENST00000581627 80 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AP001160.2-201ENST00000596071 487 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC131009.4-201ENST00000624048 1740 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 AC013726.1-201ENST00000563747 2285 ntBASIC13.66□□□□□ -0.22
C11orf88Q6PI97 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf88Q6PI97 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms