Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 FAM207CP-201ENST00000443486 507 ntBASIC16.75■□□□□ 0.27
KRT39Q6A163 RN7SL399P-201ENST00000471648 279 ntBASIC16.75■□□□□ 0.27
KRT39Q6A163 FAM86LP-201ENST00000478302 853 ntBASIC16.75■□□□□ 0.27
KRT39Q6A163 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT39Q6A163 SERBP1P5-201ENST00000510079 1181 ntBASIC16.75■□□□□ 0.27
KRT39Q6A163 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.75■□□□□ 0.27
KRT39Q6A163 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.75■□□□□ 0.27
KRT39Q6A163 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.75■□□□□ 0.27
KRT39Q6A163 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.75■□□□□ 0.27
KRT39Q6A163 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT39Q6A163 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT39Q6A163 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT39Q6A163 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT39Q6A163 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
KRT39Q6A163 MROH4P-201ENST00000431302 1578 ntBASIC16.75■□□□□ 0.27
KRT39Q6A163 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT39Q6A163 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KRT39Q6A163 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
KRT39Q6A163 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT39Q6A163 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KRT39Q6A163 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT39Q6A163 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KRT39Q6A163 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT39Q6A163 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT39Q6A163 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
KRT39Q6A163 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT39Q6A163 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT39Q6A163 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT39Q6A163 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT39Q6A163 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT39Q6A163 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT39Q6A163 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT39Q6A163 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.74■□□□□ 0.27
KRT39Q6A163 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
KRT39Q6A163 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT39Q6A163 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT39Q6A163 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT39Q6A163 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
KRT39Q6A163 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
KRT39Q6A163 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT39Q6A163 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT39Q6A163 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT39Q6A163 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT39Q6A163 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT39Q6A163 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
KRT39Q6A163 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT39Q6A163 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT39Q6A163 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT39Q6A163 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT39Q6A163 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms