Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 AC013726.1-201ENST00000563747 2285 ntBASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 RN7SL258P-201ENST00000478664 300 ntBASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 MIR5196-201ENST00000578146 115 ntBASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 AL645933.1-201ENST00000440087 609 ntBASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 AP002803.1-201ENST00000528836 498 ntBASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 AC009084.3-201ENST00000623356 437 ntBASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 AP000845.1-201ENST00000581677 2131 ntBASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
VPS13DQ5THJ4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AL136301.1-201ENST00000615830 422 ntBASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AL157791.1-201ENST00000553667 1699 ntBASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AC003102.2-201ENST00000589195 1469 ntBASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AC133540.1-201ENST00000620845 1019 ntBASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms