Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBQ06643 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
LTBQ06643 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBQ06643 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBQ06643 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LTBQ06643 AC074338.1-201ENST00000416825 156 ntBASIC14.22□□□□□ -0.13
LTBQ06643 AL080243.2-201ENST00000418783 582 ntBASIC14.22□□□□□ -0.13
LTBQ06643 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBQ06643 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBQ06643 SERBP1P5-201ENST00000510079 1181 ntBASIC14.22□□□□□ -0.13
LTBQ06643 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBQ06643 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBQ06643 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.22□□□□□ -0.13
LTBQ06643 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.22□□□□□ -0.13
LTBQ06643 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBQ06643 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBQ06643 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.22□□□□□ -0.13
LTBQ06643 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 CETN4P-206ENST00000642099 2168 ntBASIC14.22□□□□□ -0.13
LTBQ06643 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
LTBQ06643 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LTBQ06643 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBQ06643 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBQ06643 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBQ06643 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.21□□□□□ -0.13
LTBQ06643 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.21□□□□□ -0.13
LTBQ06643 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.21□□□□□ -0.13
LTBQ06643 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.21□□□□□ -0.13
LTBQ06643 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.21□□□□□ -0.13
LTBQ06643 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LTBQ06643 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.21□□□□□ -0.13
LTBQ06643 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 CU639417.3-201ENST00000624240 1404 ntBASIC14.21□□□□□ -0.13
LTBQ06643 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LTBQ06643 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LTBQ06643 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LTBQ06643 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.21□□□□□ -0.14
LTBQ06643 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.21□□□□□ -0.14
LTBQ06643 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.21□□□□□ -0.14
LTBQ06643 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
LTBQ06643 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.21□□□□□ -0.14
LTBQ06643 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.21□□□□□ -0.14
LTBQ06643 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
LTBQ06643 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LTBQ06643 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBQ06643 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.2□□□□□ -0.14
LTBQ06643 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LTBQ06643 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LTBQ06643 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBQ06643 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBQ06643 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LTBQ06643 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LTBQ06643 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LTBQ06643 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.2□□□□□ -0.14
LTBQ06643 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LTBQ06643 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms