Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1AQ02539 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
HIST1H1AQ02539 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 YBX2P1-201ENST00000394192 760 ntBASIC11.98□□□□□ -0.49
HIST1H1AQ02539 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 KRT18P58-201ENST00000527480 1120 ntBASIC11.98□□□□□ -0.49
HIST1H1AQ02539 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AC026120.1-201ENST00000611536 926 ntBASIC11.98□□□□□ -0.49
HIST1H1AQ02539 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AC092902.6-201ENST00000641783 218 ntBASIC11.98□□□□□ -0.49
HIST1H1AQ02539 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.98□□□□□ -0.49
HIST1H1AQ02539 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HIST1H1AQ02539 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 UXT-AS1-201ENST00000590504 1525 ntBASIC11.97□□□□□ -0.49
HIST1H1AQ02539 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms