Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AC236430.1-201ENST00000402231 743 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 DFFBP1-201ENST00000433250 979 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 HMGN1P19-201ENST00000436976 333 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AC002472.2-201ENST00000442739 958 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 MIR4745-201ENST00000577608 62 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 RN7SL204P-201ENST00000582831 262 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AL132655.2-201ENST00000596276 594 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 AL645728.2-202ENST00000641679 227 ntBASIC14.64□□□□□ -0.07
TNFRSF17Q02223 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF17Q02223 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 RN7SL399P-201ENST00000471648 279 ntBASIC14.63□□□□□ -0.07
TNFRSF17Q02223 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 NORAD-201ENST00000565493 5339 ntBASIC14.63□□□□□ -0.07
TNFRSF17Q02223 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 CICP11-201ENST00000434745 2827 ntBASIC14.63□□□□□ -0.07
TNFRSF17Q02223 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 LINC02228-204ENST00000642115 2962 ntBASIC14.63□□□□□ -0.07
TNFRSF17Q02223 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.63□□□□□ -0.07
TNFRSF17Q02223 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 AL391825.1-201ENST00000457671 1364 ntBASIC14.62□□□□□ -0.07
TNFRSF17Q02223 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF17Q02223 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms