Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
HSPG2P98160 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC9.29□□□□□ -0.92
HSPG2P98160 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HSPG2P98160 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
HSPG2P98160 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 BAK1P1-201ENST00000317045 636 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC9.28□□□□□ -0.92
HSPG2P98160 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC9.28□□□□□ -0.92
HSPG2P98160 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC9.28□□□□□ -0.92
HSPG2P98160 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC9.28□□□□□ -0.92
HSPG2P98160 AP005264.6-204ENST00000588436 719 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC9.28□□□□□ -0.92
HSPG2P98160 AC133540.1-201ENST00000620845 1019 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 AC106820.2-201ENST00000563775 3264 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC9.28□□□□□ -0.92
HSPG2P98160 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
HSPG2P98160 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC9.28□□□□□ -0.92
HSPG2P98160 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 CSNK1G2P1-201ENST00000442675 955 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 AL359258.3-201ENST00000622910 2331 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
HSPG2P98160 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC9.28□□□□□ -0.92
HSPG2P98160 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC9.28□□□□□ -0.92
HSPG2P98160 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
HSPG2P98160 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC9.28□□□□□ -0.92
HSPG2P98160 AC140113.1-201ENST00000603467 169 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 ZNF436-AS1-201ENST00000335648 2547 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 REXO1L2P-201ENST00000425429 2069 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 OR10N1P-201ENST00000392758 869 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 NME4-203ENST00000397722 1232 ntTSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 SKA2-202ENST00000437036 625 ntTSL 2 BASIC9.28□□□□□ -0.92
HSPG2P98160 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 AC009884.2-201ENST00000603110 324 ntBASIC9.28□□□□□ -0.92
HSPG2P98160 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC9.28□□□□□ -0.92
HSPG2P98160 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
HSPG2P98160 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
HSPG2P98160 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC9.27□□□□□ -0.92
HSPG2P98160 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
HSPG2P98160 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC9.27□□□□□ -0.92
HSPG2P98160 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
HSPG2P98160 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
HSPG2P98160 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
HSPG2P98160 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
HSPG2P98160 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
HSPG2P98160 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC9.27□□□□□ -0.92
HSPG2P98160 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.92
HSPG2P98160 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
HSPG2P98160 CYP4F36P-201ENST00000589193 186 ntBASIC9.27□□□□□ -0.92
HSPG2P98160 AC006116.2-201ENST00000589958 988 ntBASIC9.27□□□□□ -0.92
HSPG2P98160 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC9.27□□□□□ -0.92
HSPG2P98160 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
HSPG2P98160 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
HSPG2P98160 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
HSPG2P98160 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms