Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAE1P78406 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.71□□□□□ -0.06
RAE1P78406 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.7□□□□□ -0.06
RAE1P78406 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.7□□□□□ -0.06
RAE1P78406 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.7□□□□□ -0.06
RAE1P78406 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.7□□□□□ -0.06
RAE1P78406 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.7□□□□□ -0.06
RAE1P78406 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.7□□□□□ -0.06
RAE1P78406 MEIS3P1-201ENST00000495167 958 ntBASIC14.7□□□□□ -0.06
RAE1P78406 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.7□□□□□ -0.06
RAE1P78406 SRD5A3P1-201ENST00000603021 949 ntBASIC14.7□□□□□ -0.06
RAE1P78406 AC006538.3-201ENST00000612495 578 ntBASIC14.7□□□□□ -0.06
RAE1P78406 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.7□□□□□ -0.06
RAE1P78406 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RAE1P78406 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.7□□□□□ -0.06
RAE1P78406 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.7□□□□□ -0.06
RAE1P78406 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RAE1P78406 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 FAM45BP-202ENST00000592932 1624 ntBASIC14.7□□□□□ -0.06
RAE1P78406 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAE1P78406 CLK3P2-201ENST00000427566 1453 ntBASIC14.69□□□□□ -0.06
RAE1P78406 AC012508.2-201ENST00000567613 1472 ntBASIC14.69□□□□□ -0.06
RAE1P78406 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.69□□□□□ -0.06
RAE1P78406 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RAE1P78406 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
RAE1P78406 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.69□□□□□ -0.06
RAE1P78406 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.69□□□□□ -0.06
RAE1P78406 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 MRPS18AP1-201ENST00000414458 589 ntBASIC14.69□□□□□ -0.06
RAE1P78406 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.69□□□□□ -0.06
RAE1P78406 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.69□□□□□ -0.06
RAE1P78406 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.69□□□□□ -0.06
RAE1P78406 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.69□□□□□ -0.06
RAE1P78406 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.69□□□□□ -0.06
RAE1P78406 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 AC135586.1-201ENST00000539323 574 ntBASIC14.69□□□□□ -0.06
RAE1P78406 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.69□□□□□ -0.06
RAE1P78406 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAE1P78406 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms