Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC244107.1-201ENST00000442033 332 ntBASIC15.14■□□□□ 0.01
YBX1P67809 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.14■□□□□ 0.01
YBX1P67809 SLED1-202ENST00000512051 380 ntBASIC15.14■□□□□ 0.01
YBX1P67809 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.14■□□□□ 0.01
YBX1P67809 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.14■□□□□ 0.01
YBX1P67809 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
YBX1P67809 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
YBX1P67809 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.14■□□□□ 0.01
YBX1P67809 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.14■□□□□ 0.01
YBX1P67809 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YBX1P67809 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
YBX1P67809 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YBX1P67809 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
YBX1P67809 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
YBX1P67809 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
YBX1P67809 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
YBX1P67809 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
YBX1P67809 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.13■□□□□ 0.01
YBX1P67809 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.13■□□□□ 0.01
YBX1P67809 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
YBX1P67809 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
YBX1P67809 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.13■□□□□ 0.01
YBX1P67809 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.13■□□□□ 0.01
YBX1P67809 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
YBX1P67809 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.13■□□□□ 0.01
YBX1P67809 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.13■□□□□ 0.01
YBX1P67809 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 CLK3P2-201ENST00000427566 1453 ntBASIC15.13■□□□□ 0.01
YBX1P67809 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.13■□□□□ 0.01
YBX1P67809 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.13■□□□□ 0.01
YBX1P67809 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
YBX1P67809 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.12■□□□□ 0.01
YBX1P67809 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
YBX1P67809 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.12■□□□□ 0.01
YBX1P67809 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.12■□□□□ 0.01
YBX1P67809 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.12■□□□□ 0.01
YBX1P67809 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.12■□□□□ 0.01
YBX1P67809 TIMM17BP1-201ENST00000545713 516 ntBASIC15.12■□□□□ 0.01
YBX1P67809 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 AC138761.1-201ENST00000584393 385 ntBASIC15.12■□□□□ 0.01
YBX1P67809 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.12■□□□□ 0.01
YBX1P67809 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 AL391069.4-201ENST00000609583 481 ntBASIC15.12■□□□□ 0.01
YBX1P67809 MIR8072-201ENST00000614241 80 ntBASIC15.12■□□□□ 0.01
YBX1P67809 AL158212.4-201ENST00000624062 1286 ntBASIC15.12■□□□□ 0.01
YBX1P67809 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.12■□□□□ 0.01
YBX1P67809 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
YBX1P67809 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
YBX1P67809 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms