Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.55□□□□□ -0.56
CMC4P56277 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 KRT8P22-201ENST00000562317 1415 ntBASIC11.55□□□□□ -0.56
CMC4P56277 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 C1QBPP1-201ENST00000400117 770 ntBASIC11.55□□□□□ -0.56
CMC4P56277 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.55□□□□□ -0.56
CMC4P56277 AL589987.1-201ENST00000453380 819 ntBASIC11.55□□□□□ -0.56
CMC4P56277 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 AC026410.3-201ENST00000514280 936 ntBASIC11.55□□□□□ -0.56
CMC4P56277 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.55□□□□□ -0.56
CMC4P56277 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.55□□□□□ -0.56
CMC4P56277 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.55□□□□□ -0.56
CMC4P56277 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 AC009486.1-201ENST00000569860 813 ntBASIC11.55□□□□□ -0.56
CMC4P56277 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.55□□□□□ -0.56
CMC4P56277 MIR8072-201ENST00000614241 80 ntBASIC11.55□□□□□ -0.56
CMC4P56277 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CMC4P56277 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CMC4P56277 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 INTS4P2-202ENST00000614726 2019 ntBASIC11.55□□□□□ -0.56
CMC4P56277 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.55□□□□□ -0.56
CMC4P56277 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
CMC4P56277 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CMC4P56277 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.54□□□□□ -0.56
CMC4P56277 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CMC4P56277 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CMC4P56277 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
CMC4P56277 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CMC4P56277 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 ACKR1-201ENST00000368121 1240 ntBASIC11.54□□□□□ -0.56
CMC4P56277 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CMC4P56277 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.54□□□□□ -0.56
CMC4P56277 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.54□□□□□ -0.56
CMC4P56277 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.54□□□□□ -0.56
CMC4P56277 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.54□□□□□ -0.56
CMC4P56277 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
CMC4P56277 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.54□□□□□ -0.56
CMC4P56277 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.54□□□□□ -0.56
CMC4P56277 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.54□□□□□ -0.56
CMC4P56277 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.54□□□□□ -0.56
CMC4P56277 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CMC4P56277 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CMC4P56277 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms