Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
FOXA3P55318 AL031133.1-201ENST00000406807 723 ntBASIC11.74□□□□□ -0.53
FOXA3P55318 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.74□□□□□ -0.53
FOXA3P55318 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.74□□□□□ -0.53
FOXA3P55318 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.74□□□□□ -0.53
FOXA3P55318 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.74□□□□□ -0.53
FOXA3P55318 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
FOXA3P55318 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.74□□□□□ -0.53
FOXA3P55318 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.73□□□□□ -0.53
FOXA3P55318 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
FOXA3P55318 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
FOXA3P55318 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.73□□□□□ -0.53
FOXA3P55318 AC018892.3-201ENST00000623986 2499 ntBASIC11.73□□□□□ -0.53
FOXA3P55318 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.73□□□□□ -0.53
FOXA3P55318 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.73□□□□□ -0.53
FOXA3P55318 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
FOXA3P55318 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
FOXA3P55318 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.72□□□□□ -0.53
FOXA3P55318 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
FOXA3P55318 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 REXO1L1P-202ENST00000608646 1974 ntBASIC11.72□□□□□ -0.53
FOXA3P55318 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
FOXA3P55318 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
FOXA3P55318 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
FOXA3P55318 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms