Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NR1H2P55055 FAM58CP-201ENST00000435741 640 ntBASIC14.83□□□□□ -0.04
NR1H2P55055 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.83□□□□□ -0.04
NR1H2P55055 PAWRP1-201ENST00000451083 565 ntBASIC14.83□□□□□ -0.04
NR1H2P55055 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.83□□□□□ -0.04
NR1H2P55055 AC068137.2-201ENST00000605408 478 ntBASIC14.83□□□□□ -0.04
NR1H2P55055 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H2P55055 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H2P55055 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 TOP3BP1-201ENST00000420768 1380 ntBASIC14.83□□□□□ -0.04
NR1H2P55055 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NR1H2P55055 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H2P55055 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.83□□□□□ -0.04
NR1H2P55055 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.83□□□□□ -0.04
NR1H2P55055 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NR1H2P55055 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NR1H2P55055 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 FAM185BP-201ENST00000443595 716 ntBASIC14.82□□□□□ -0.04
NR1H2P55055 AL513480.1-201ENST00000451731 511 ntBASIC14.82□□□□□ -0.04
NR1H2P55055 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.82□□□□□ -0.04
NR1H2P55055 AP000344.2-201ENST00000512987 629 ntBASIC14.82□□□□□ -0.04
NR1H2P55055 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 MIR4492-201ENST00000581627 80 ntBASIC14.82□□□□□ -0.04
NR1H2P55055 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NR1H2P55055 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.82□□□□□ -0.04
NR1H2P55055 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NR1H2P55055 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
NR1H2P55055 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
NR1H2P55055 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.81□□□□□ -0.04
NR1H2P55055 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H2P55055 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms