Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.97■□□□□ 0.15
ATXN3P54252 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.97■□□□□ 0.15
ATXN3P54252 TMEM14DP-201ENST00000422205 345 ntBASIC15.97■□□□□ 0.15
ATXN3P54252 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.97■□□□□ 0.15
ATXN3P54252 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.97■□□□□ 0.15
ATXN3P54252 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ATXN3P54252 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.97■□□□□ 0.15
ATXN3P54252 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.97■□□□□ 0.15
ATXN3P54252 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.97■□□□□ 0.15
ATXN3P54252 AL606495.2-201ENST00000605867 535 ntBASIC15.97■□□□□ 0.15
ATXN3P54252 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATXN3P54252 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 REXO1L6P-201ENST00000603433 1515 ntBASIC15.97■□□□□ 0.15
ATXN3P54252 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATXN3P54252 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATXN3P54252 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATXN3P54252 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATXN3P54252 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ATXN3P54252 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
ATXN3P54252 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 FAM86MP-201ENST00000340703 885 ntBASIC15.96■□□□□ 0.15
ATXN3P54252 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.96■□□□□ 0.15
ATXN3P54252 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.96■□□□□ 0.15
ATXN3P54252 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.96■□□□□ 0.15
ATXN3P54252 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 RRP7BP-205ENST00000566851 833 ntBASIC15.96■□□□□ 0.15
ATXN3P54252 AC013467.2-201ENST00000605472 835 ntBASIC15.96■□□□□ 0.15
ATXN3P54252 AC084346.2-201ENST00000607097 949 ntBASIC15.96■□□□□ 0.15
ATXN3P54252 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.96■□□□□ 0.15
ATXN3P54252 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.96■□□□□ 0.15
ATXN3P54252 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATXN3P54252 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.96■□□□□ 0.14
ATXN3P54252 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATXN3P54252 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATXN3P54252 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
ATXN3P54252 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATXN3P54252 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
ATXN3P54252 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
ATXN3P54252 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.95■□□□□ 0.14
ATXN3P54252 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ATXN3P54252 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ATXN3P54252 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 GGT4P-201ENST00000623672 1708 ntBASIC15.95■□□□□ 0.14
ATXN3P54252 AC006449.6-201ENST00000612330 2296 ntBASIC15.95■□□□□ 0.14
ATXN3P54252 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.95■□□□□ 0.14
ATXN3P54252 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.95■□□□□ 0.14
ATXN3P54252 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.95■□□□□ 0.14
ATXN3P54252 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 AL139010.1-201ENST00000454878 894 ntBASIC15.95■□□□□ 0.14
ATXN3P54252 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.95■□□□□ 0.14
ATXN3P54252 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
ATXN3P54252 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATXN3P54252 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.95■□□□□ 0.14
ATXN3P54252 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.95■□□□□ 0.14
ATXN3P54252 MIR4259-201ENST00000584466 101 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms