Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 AC012441.1-201ENST00000446669 685 ntBASIC15.09■□□□□ 0.01
PDX1P52945 AL355864.2-201ENST00000447420 863 ntBASIC15.09■□□□□ 0.01
PDX1P52945 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
PDX1P52945 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.09■□□□□ 0.01
PDX1P52945 FTH1P14-201ENST00000482930 551 ntBASIC15.09■□□□□ 0.01
PDX1P52945 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.09■□□□□ 0.01
PDX1P52945 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PDX1P52945 AC000095.1-201ENST00000603208 874 ntBASIC15.09■□□□□ 0.01
PDX1P52945 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDX1P52945 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDX1P52945 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.08■□□□□ 0.01
PDX1P52945 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDX1P52945 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
PDX1P52945 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PDX1P52945 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
PDX1P52945 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0.01
PDX1P52945 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 PRAL-201ENST00000624952 3286 ntBASIC15.08■□□□□ 0
PDX1P52945 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
PDX1P52945 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.08■□□□□ 0
PDX1P52945 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.08■□□□□ 0
PDX1P52945 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.08■□□□□ 0
PDX1P52945 AC007551.1-201ENST00000457394 519 ntBASIC15.08■□□□□ 0
PDX1P52945 PHKG1P2-201ENST00000457537 863 ntBASIC15.08■□□□□ 0
PDX1P52945 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
PDX1P52945 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.08■□□□□ 0
PDX1P52945 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 AC097359.3-201ENST00000603982 1210 ntBASIC15.08■□□□□ 0
PDX1P52945 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.08■□□□□ 0
PDX1P52945 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.08■□□□□ 0
PDX1P52945 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PDX1P52945 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PDX1P52945 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.08■□□□□ 0
PDX1P52945 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
PDX1P52945 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PDX1P52945 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 KRT8P44-201ENST00000441609 1350 ntBASIC15.08■□□□□ 0
PDX1P52945 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PDX1P52945 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.08■□□□□ 0
PDX1P52945 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PDX1P52945 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
PDX1P52945 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.08■□□□□ 0
PDX1P52945 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDX1P52945 AP005117.1-202ENST00000581724 1908 ntBASIC15.07■□□□□ 0
PDX1P52945 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.07■□□□□ 0
PDX1P52945 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.07■□□□□ 0
PDX1P52945 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PDX1P52945 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
PDX1P52945 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 BAATP1-201ENST00000412284 1225 ntBASIC15.07■□□□□ 0
PDX1P52945 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.07■□□□□ 0
PDX1P52945 FAM21FP-201ENST00000426241 1131 ntBASIC15.07■□□□□ 0
PDX1P52945 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.07■□□□□ 0
PDX1P52945 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDX1P52945 AC108725.1-201ENST00000495472 409 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms