Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.83■□□□□ 0.28
PDE6CP51160 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.83■□□□□ 0.28
PDE6CP51160 SPDYE22P-201ENST00000582158 798 ntBASIC16.83■□□□□ 0.28
PDE6CP51160 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.83■□□□□ 0.28
PDE6CP51160 AL662799.1-202ENST00000614205 422 ntBASIC16.83■□□□□ 0.28
PDE6CP51160 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.83■□□□□ 0.28
PDE6CP51160 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDE6CP51160 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDE6CP51160 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6CP51160 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PDE6CP51160 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6CP51160 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.82■□□□□ 0.28
PDE6CP51160 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 AL353779.1-201ENST00000434793 351 ntBASIC16.82■□□□□ 0.28
PDE6CP51160 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PDE6CP51160 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
PDE6CP51160 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.82■□□□□ 0.28
PDE6CP51160 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.82■□□□□ 0.28
PDE6CP51160 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.82■□□□□ 0.28
PDE6CP51160 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.82■□□□□ 0.28
PDE6CP51160 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6CP51160 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDE6CP51160 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.82■□□□□ 0.28
PDE6CP51160 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.81■□□□□ 0.28
PDE6CP51160 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.81■□□□□ 0.28
PDE6CP51160 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDE6CP51160 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDE6CP51160 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDE6CP51160 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PDE6CP51160 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PDE6CP51160 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 AC087499.6-201ENST00000411576 835 ntBASIC16.81■□□□□ 0.28
PDE6CP51160 AC005034.1-201ENST00000426657 489 ntBASIC16.81■□□□□ 0.28
PDE6CP51160 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.81■□□□□ 0.28
PDE6CP51160 TARDBPP1-201ENST00000442013 1203 ntBASIC16.81■□□□□ 0.28
PDE6CP51160 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 AC093004.1-201ENST00000508850 424 ntBASIC16.81■□□□□ 0.28
PDE6CP51160 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.81■□□□□ 0.28
PDE6CP51160 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.81■□□□□ 0.28
PDE6CP51160 AL512361.1-201ENST00000554200 418 ntBASIC16.81■□□□□ 0.28
PDE6CP51160 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PDE6CP51160 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.81■□□□□ 0.28
PDE6CP51160 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.81■□□□□ 0.28
PDE6CP51160 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.81■□□□□ 0.28
PDE6CP51160 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDE6CP51160 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDE6CP51160 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDE6CP51160 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms