Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PRIM2P49643 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PRIM2P49643 SPDYE7P-202ENST00000420373 878 ntBASIC14.86□□□□□ -0.03
PRIM2P49643 AL645939.2-201ENST00000427340 991 ntBASIC14.86□□□□□ -0.03
PRIM2P49643 GPS2P2-201ENST00000430745 888 ntBASIC14.86□□□□□ -0.03
PRIM2P49643 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.86□□□□□ -0.03
PRIM2P49643 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 SPDYE14P-201ENST00000442619 822 ntBASIC14.86□□□□□ -0.03
PRIM2P49643 AP006288.1-201ENST00000446065 395 ntBASIC14.86□□□□□ -0.03
PRIM2P49643 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.86□□□□□ -0.03
PRIM2P49643 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 SNHG9-202ENST00000564014 471 ntBASIC14.86□□□□□ -0.03
PRIM2P49643 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PRIM2P49643 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PRIM2P49643 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PRIM2P49643 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.86□□□□□ -0.03
PRIM2P49643 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.86□□□□□ -0.03
PRIM2P49643 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRIM2P49643 AC138969.2-201ENST00000532739 9932 ntBASIC14.86□□□□□ -0.03
PRIM2P49643 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.85□□□□□ -0.03
PRIM2P49643 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PRIM2P49643 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.85□□□□□ -0.03
PRIM2P49643 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.85□□□□□ -0.03
PRIM2P49643 CNN2P11-201ENST00000429351 262 ntBASIC14.85□□□□□ -0.03
PRIM2P49643 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.85□□□□□ -0.03
PRIM2P49643 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.85□□□□□ -0.03
PRIM2P49643 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.85□□□□□ -0.03
PRIM2P49643 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 AL596442.2-201ENST00000610240 980 ntBASIC14.85□□□□□ -0.03
PRIM2P49643 AC007967.4-201ENST00000614700 386 ntBASIC14.85□□□□□ -0.03
PRIM2P49643 MIR6080-201ENST00000617359 66 ntBASIC14.85□□□□□ -0.03
PRIM2P49643 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.85□□□□□ -0.03
PRIM2P49643 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PRIM2P49643 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.85□□□□□ -0.03
PRIM2P49643 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.85□□□□□ -0.03
PRIM2P49643 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PRIM2P49643 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRIM2P49643 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PRIM2P49643 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.84□□□□□ -0.03
PRIM2P49643 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PRIM2P49643 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PRIM2P49643 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.84□□□□□ -0.03
PRIM2P49643 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PRIM2P49643 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.84□□□□□ -0.03
PRIM2P49643 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PRIM2P49643 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.84□□□□□ -0.03
PRIM2P49643 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.84□□□□□ -0.03
PRIM2P49643 ST20-AS1-201ENST00000560255 4223 ntBASIC14.84□□□□□ -0.03
PRIM2P49643 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.84□□□□□ -0.03
PRIM2P49643 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PRIM2P49643 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms