Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC009542.2-202ENST00000619004 1067 ntBASIC16.43■□□□□ 0.22
BRCC3P46736 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.43■□□□□ 0.22
BRCC3P46736 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
BRCC3P46736 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.43■□□□□ 0.22
BRCC3P46736 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
BRCC3P46736 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BRCC3P46736 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.42■□□□□ 0.22
BRCC3P46736 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 AC138951.2-201ENST00000623455 1161 ntBASIC16.42■□□□□ 0.22
BRCC3P46736 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.42■□□□□ 0.22
BRCC3P46736 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.42■□□□□ 0.22
BRCC3P46736 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.42■□□□□ 0.22
BRCC3P46736 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.42■□□□□ 0.22
BRCC3P46736 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
BRCC3P46736 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.42■□□□□ 0.22
BRCC3P46736 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCC3P46736 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCC3P46736 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCC3P46736 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCC3P46736 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 ACTBP11-201ENST00000436287 1126 ntBASIC16.41■□□□□ 0.22
BRCC3P46736 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.41■□□□□ 0.22
BRCC3P46736 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.41■□□□□ 0.22
BRCC3P46736 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.41■□□□□ 0.22
BRCC3P46736 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.41■□□□□ 0.22
BRCC3P46736 AC079316.1-201ENST00000548397 411 ntBASIC16.41■□□□□ 0.22
BRCC3P46736 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.41■□□□□ 0.22
BRCC3P46736 SAMD11P1-201ENST00000571429 661 ntBASIC16.41■□□□□ 0.22
BRCC3P46736 RN7SL219P-201ENST00000582872 296 ntBASIC16.41■□□□□ 0.22
BRCC3P46736 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 AC008687.7-202ENST00000637404 953 ntBASIC16.41■□□□□ 0.22
BRCC3P46736 PRSS30P-206ENST00000641773 873 ntBASIC16.41■□□□□ 0.22
BRCC3P46736 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.41■□□□□ 0.22
BRCC3P46736 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BRCC3P46736 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
BRCC3P46736 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.4■□□□□ 0.22
BRCC3P46736 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 AC008741.2-201ENST00000612792 3115 ntBASIC16.4■□□□□ 0.22
BRCC3P46736 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
BRCC3P46736 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
BRCC3P46736 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BRCC3P46736 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms