Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC073648.2-201ENST00000510116 352 ntBASIC12.79□□□□□ -0.36
NKX2-1P43699 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 AC105339.3-201ENST00000560043 636 ntBASIC12.79□□□□□ -0.36
NKX2-1P43699 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
NKX2-1P43699 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-1P43699 AL450472.2-201ENST00000603663 1156 ntBASIC12.79□□□□□ -0.36
NKX2-1P43699 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 AC008735.5-201ENST00000623544 497 ntBASIC12.79□□□□□ -0.36
NKX2-1P43699 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 BX640514.1-201ENST00000583223 1918 ntBASIC12.79□□□□□ -0.36
NKX2-1P43699 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
NKX2-1P43699 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-1P43699 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
NKX2-1P43699 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 AC092474.2-201ENST00000424288 719 ntBASIC12.78□□□□□ -0.36
NKX2-1P43699 PRSS29P-201ENST00000440800 595 ntBASIC12.78□□□□□ -0.36
NKX2-1P43699 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.78□□□□□ -0.36
NKX2-1P43699 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.78□□□□□ -0.36
NKX2-1P43699 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 IFNL4P1-201ENST00000607083 540 ntBASIC12.78□□□□□ -0.36
NKX2-1P43699 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
NKX2-1P43699 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.78□□□□□ -0.36
NKX2-1P43699 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
NKX2-1P43699 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.78□□□□□ -0.36
NKX2-1P43699 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
NKX2-1P43699 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.77□□□□□ -0.36
NKX2-1P43699 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX2-1P43699 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
NKX2-1P43699 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX2-1P43699 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
NKX2-1P43699 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
NKX2-1P43699 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
NKX2-1P43699 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.77□□□□□ -0.36
NKX2-1P43699 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms