Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 SPDYE19P-201ENST00000338590 713 ntBASIC17.52■□□□□ 0.4
PRPHP41219 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PRPHP41219 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.52■□□□□ 0.4
PRPHP41219 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.52■□□□□ 0.4
PRPHP41219 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.52■□□□□ 0.4
PRPHP41219 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.52■□□□□ 0.4
PRPHP41219 SPTLC1P1-201ENST00000447199 261 ntBASIC17.52■□□□□ 0.4
PRPHP41219 AC036164.1-201ENST00000570544 333 ntBASIC17.52■□□□□ 0.4
PRPHP41219 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PRPHP41219 AC011467.4-201ENST00000594891 528 ntBASIC17.52■□□□□ 0.4
PRPHP41219 AC099568.2-201ENST00000609194 695 ntBASIC17.52■□□□□ 0.4
PRPHP41219 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
PRPHP41219 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.52■□□□□ 0.4
PRPHP41219 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.52■□□□□ 0.4
PRPHP41219 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.52■□□□□ 0.4
PRPHP41219 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.52■□□□□ 0.4
PRPHP41219 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRPHP41219 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRPHP41219 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PRPHP41219 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
PRPHP41219 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PRPHP41219 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.52■□□□□ 0.39
PRPHP41219 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PRPHP41219 WASH3P-207ENST00000560956 1394 ntBASIC17.52■□□□□ 0.39
PRPHP41219 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.52■□□□□ 0.39
PRPHP41219 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.52■□□□□ 0.39
PRPHP41219 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PRPHP41219 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PRPHP41219 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.51■□□□□ 0.39
PRPHP41219 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.51■□□□□ 0.39
PRPHP41219 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRPHP41219 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.51■□□□□ 0.39
PRPHP41219 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.51■□□□□ 0.39
PRPHP41219 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PRPHP41219 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.51■□□□□ 0.39
PRPHP41219 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.51■□□□□ 0.39
PRPHP41219 RN7SL399P-201ENST00000471648 279 ntBASIC17.51■□□□□ 0.39
PRPHP41219 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 AC093004.1-201ENST00000508850 424 ntBASIC17.51■□□□□ 0.39
PRPHP41219 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.51■□□□□ 0.39
PRPHP41219 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.51■□□□□ 0.39
PRPHP41219 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.51■□□□□ 0.39
PRPHP41219 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.51■□□□□ 0.39
PRPHP41219 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRPHP41219 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
PRPHP41219 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.5■□□□□ 0.39
PRPHP41219 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.5■□□□□ 0.39
PRPHP41219 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms