Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 INE2-201ENST00000630399 1874 ntBASIC16.65■□□□□ 0.26
HOXC8P31273 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC8P31273 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXC8P31273 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.64■□□□□ 0.26
HOXC8P31273 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HOXC8P31273 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.64■□□□□ 0.26
HOXC8P31273 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
HOXC8P31273 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 AC026691.1-201ENST00000602502 2017 ntBASIC16.64■□□□□ 0.25
HOXC8P31273 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 AL139384.1-201ENST00000612143 3047 ntBASIC16.64■□□□□ 0.25
HOXC8P31273 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.64■□□□□ 0.25
HOXC8P31273 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
HOXC8P31273 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.64■□□□□ 0.25
HOXC8P31273 AC091812.3-201ENST00000621362 345 ntBASIC16.64■□□□□ 0.25
HOXC8P31273 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 AC012508.2-201ENST00000567613 1472 ntBASIC16.64■□□□□ 0.25
HOXC8P31273 AL365203.3-201ENST00000609742 2057 ntBASIC16.64■□□□□ 0.25
HOXC8P31273 AC009093.2-202ENST00000620513 2079 ntBASIC16.64■□□□□ 0.25
HOXC8P31273 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HOXC8P31273 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC8P31273 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HOXC8P31273 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC8P31273 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC8P31273 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC8P31273 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC8P31273 ELK2AP-201ENST00000392510 1007 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.63■□□□□ 0.25
HOXC8P31273 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC8P31273 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC8P31273 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.63■□□□□ 0.25
HOXC8P31273 UPF3AP2-201ENST00000457924 1132 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 TUBB8P8-201ENST00000458717 1058 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 RN7SL769P-201ENST00000469386 295 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC8P31273 AC013355.1-201ENST00000562625 723 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 RN7SL774P-201ENST00000577467 290 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 AC097724.1-201ENST00000609581 426 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC8P31273 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HOXC8P31273 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC8P31273 AC011840.2-201ENST00000563063 1520 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 LINC02199-201ENST00000506655 2702 ntBASIC16.63■□□□□ 0.25
HOXC8P31273 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.63■□□□□ 0.25
HOXC8P31273 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC8P31273 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HOXC8P31273 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.63■□□□□ 0.25
HOXC8P31273 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HOXC8P31273 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
HOXC8P31273 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HOXC8P31273 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.62■□□□□ 0.25
HOXC8P31273 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms