Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
COL8A2P25067 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.12□□□□□ -0.31
COL8A2P25067 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.12□□□□□ -0.31
COL8A2P25067 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.12□□□□□ -0.31
COL8A2P25067 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.12□□□□□ -0.31
COL8A2P25067 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 USP32P1-208ENST00000506594 1164 ntBASIC13.12□□□□□ -0.31
COL8A2P25067 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
COL8A2P25067 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.12□□□□□ -0.31
COL8A2P25067 CLUHP6-201ENST00000580789 941 ntBASIC13.12□□□□□ -0.31
COL8A2P25067 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.12□□□□□ -0.31
COL8A2P25067 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.12□□□□□ -0.31
COL8A2P25067 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.12□□□□□ -0.31
COL8A2P25067 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 AL513477.1-201ENST00000602865 2407 ntBASIC13.12□□□□□ -0.31
COL8A2P25067 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
COL8A2P25067 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
COL8A2P25067 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 MIR658-201ENST00000385210 100 ntBASIC13.11□□□□□ -0.31
COL8A2P25067 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
COL8A2P25067 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.11□□□□□ -0.31
COL8A2P25067 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 AC022210.1-201ENST00000449856 793 ntBASIC13.11□□□□□ -0.31
COL8A2P25067 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 AC026410.3-201ENST00000514280 936 ntBASIC13.11□□□□□ -0.31
COL8A2P25067 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 MIR5189-201ENST00000577370 114 ntBASIC13.11□□□□□ -0.31
COL8A2P25067 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.11□□□□□ -0.31
COL8A2P25067 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 LINC02228-204ENST00000642115 2962 ntBASIC13.11□□□□□ -0.31
COL8A2P25067 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
COL8A2P25067 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms