Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX1P22670 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RFX1P22670 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX1P22670 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.93■□□□□ 0.3
RFX1P22670 AC004840.1-201ENST00000636359 365 ntBASIC16.93■□□□□ 0.3
RFX1P22670 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFX1P22670 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RFX1P22670 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 HYMAI-201ENST00000635591 3347 ntBASIC16.93■□□□□ 0.3
RFX1P22670 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX1P22670 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RFX1P22670 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 Z97205.2-201ENST00000564697 1639 ntBASIC16.92■□□□□ 0.3
RFX1P22670 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFX1P22670 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 AC144831.1-201ENST00000573312 2656 ntBASIC16.92■□□□□ 0.3
RFX1P22670 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 SLED1-202ENST00000512051 380 ntBASIC16.92■□□□□ 0.3
RFX1P22670 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.92■□□□□ 0.3
RFX1P22670 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.92■□□□□ 0.3
RFX1P22670 AL844908.2-201ENST00000609461 460 ntBASIC16.92■□□□□ 0.3
RFX1P22670 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.92■□□□□ 0.3
RFX1P22670 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFX1P22670 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFX1P22670 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.92■□□□□ 0.3
RFX1P22670 BTBD7P1-201ENST00000447253 1453 ntBASIC16.92■□□□□ 0.3
RFX1P22670 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX1P22670 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFX1P22670 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RFX1P22670 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.91■□□□□ 0.3
RFX1P22670 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.91■□□□□ 0.3
RFX1P22670 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RFX1P22670 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.91■□□□□ 0.3
RFX1P22670 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.91■□□□□ 0.3
RFX1P22670 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms