Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.4■□□□□ 0.38
PTPRFP10586 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PTPRFP10586 FAM90A7P-201ENST00000382628 1395 ntBASIC17.4■□□□□ 0.38
PTPRFP10586 FAM90A23P-201ENST00000400136 1395 ntBASIC17.4■□□□□ 0.38
PTPRFP10586 AC006058.4-201ENST00000624016 1670 ntBASIC17.4■□□□□ 0.38
PTPRFP10586 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPRFP10586 PCDHB19P-201ENST00000570871 2371 ntBASIC17.4■□□□□ 0.38
PTPRFP10586 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPRFP10586 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPRFP10586 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPRFP10586 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTPRFP10586 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPRFP10586 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPRFP10586 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.4■□□□□ 0.38
PTPRFP10586 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTPRFP10586 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PTPRFP10586 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPRFP10586 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PTPRFP10586 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.39■□□□□ 0.38
PTPRFP10586 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPRFP10586 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTPRFP10586 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PTPRFP10586 AL157791.1-201ENST00000553667 1699 ntBASIC17.39■□□□□ 0.38
PTPRFP10586 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PTPRFP10586 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPRFP10586 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.39■□□□□ 0.37
PTPRFP10586 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.39■□□□□ 0.37
PTPRFP10586 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPRFP10586 AL132994.2-201ENST00000603120 687 ntBASIC17.39■□□□□ 0.37
PTPRFP10586 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.39■□□□□ 0.37
PTPRFP10586 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPRFP10586 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPRFP10586 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 AC006480.2-201ENST00000609770 1337 ntBASIC17.39■□□□□ 0.37
PTPRFP10586 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.39■□□□□ 0.37
PTPRFP10586 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPRFP10586 AC011742.3-201ENST00000439053 820 ntBASIC17.39■□□□□ 0.37
PTPRFP10586 Z97180.1-201ENST00000445173 988 ntBASIC17.39■□□□□ 0.37
PTPRFP10586 KLF2P1-201ENST00000447438 1042 ntBASIC17.39■□□□□ 0.37
PTPRFP10586 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
PTPRFP10586 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPRFP10586 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPRFP10586 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.39■□□□□ 0.37
PTPRFP10586 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTPRFP10586 AC020910.5-201ENST00000623668 1865 ntBASIC17.39■□□□□ 0.37
PTPRFP10586 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPRFP10586 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 AL118508.1-201ENST00000613502 2345 ntBASIC17.38■□□□□ 0.37
PTPRFP10586 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPRFP10586 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPRFP10586 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPRFP10586 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPRFP10586 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.38■□□□□ 0.37
PTPRFP10586 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPRFP10586 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 AC138894.2-201ENST00000602838 371 ntBASIC17.38■□□□□ 0.37
PTPRFP10586 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPRFP10586 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTPRFP10586 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PTPRFP10586 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.38■□□□□ 0.37
PTPRFP10586 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PTPRFP10586 AC090616.6-203ENST00000579186 1945 ntBASIC17.38■□□□□ 0.37
PTPRFP10586 CICP13-201ENST00000422015 2789 ntBASIC17.38■□□□□ 0.37
PTPRFP10586 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.38■□□□□ 0.37
PTPRFP10586 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTPRFP10586 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 CICP11-201ENST00000434745 2827 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTPRFP10586 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.37■□□□□ 0.37
PTPRFP10586 ISCA2P1-201ENST00000425548 448 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 AL157407.1-201ENST00000435784 904 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.37■□□□□ 0.37
PTPRFP10586 FGFR3P1-201ENST00000449999 601 ntBASIC17.37■□□□□ 0.37
PTPRFP10586 RN7SL67P-201ENST00000492147 296 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms