Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RETP07949 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RETP07949 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RETP07949 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.66■□□□□ 0.1
RETP07949 U82695.1-201ENST00000635752 1889 ntBASIC15.66■□□□□ 0.1
RETP07949 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.66■□□□□ 0.1
RETP07949 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RETP07949 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.66■□□□□ 0.1
RETP07949 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 AC253536.4-201ENST00000440539 267 ntBASIC15.66■□□□□ 0.1
RETP07949 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.66■□□□□ 0.1
RETP07949 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.66■□□□□ 0.1
RETP07949 AP006547.1-201ENST00000563435 692 ntBASIC15.66■□□□□ 0.1
RETP07949 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.66■□□□□ 0.1
RETP07949 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.66■□□□□ 0.1
RETP07949 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RETP07949 GNRHR2-203ENST00000581100 1187 ntBASIC15.66■□□□□ 0.1
RETP07949 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.66■□□□□ 0.1
RETP07949 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RETP07949 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
RETP07949 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.66■□□□□ 0.1
RETP07949 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.66■□□□□ 0.1
RETP07949 HYMAI-201ENST00000635591 3347 ntBASIC15.66■□□□□ 0.1
RETP07949 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.66■□□□□ 0.1
RETP07949 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.66■□□□□ 0.1
RETP07949 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RETP07949 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.65■□□□□ 0.1
RETP07949 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RETP07949 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RETP07949 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RETP07949 AC006001.1-201ENST00000325130 474 ntBASIC15.65■□□□□ 0.1
RETP07949 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RETP07949 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RETP07949 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RETP07949 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 AZGP1P1-201ENST00000411909 902 ntBASIC15.65■□□□□ 0.1
RETP07949 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.65■□□□□ 0.1
RETP07949 EEF1DP4-201ENST00000446006 880 ntBASIC15.65■□□□□ 0.1
RETP07949 EIF4HP1-201ENST00000453115 687 ntBASIC15.65■□□□□ 0.1
RETP07949 POU5F1P6-201ENST00000466990 990 ntBASIC15.65■□□□□ 0.1
RETP07949 AC022137.2-201ENST00000503482 481 ntBASIC15.65■□□□□ 0.1
RETP07949 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RETP07949 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.65■□□□□ 0.1
RETP07949 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.65■□□□□ 0.1
RETP07949 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.65■□□□□ 0.1
RETP07949 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.65■□□□□ 0.1
RETP07949 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.65■□□□□ 0.1
RETP07949 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.65■□□□□ 0.1
RETP07949 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.65■□□□□ 0.1
RETP07949 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.65■□□□□ 0.1
RETP07949 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.65■□□□□ 0.1
RETP07949 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
RETP07949 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.65■□□□□ 0.1
RETP07949 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RETP07949 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RETP07949 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RETP07949 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RETP07949 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms