Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOA1P02647 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA1P02647 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
APOA1P02647 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOA1P02647 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
APOA1P02647 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
APOA1P02647 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA1P02647 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOA1P02647 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA1P02647 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOA1P02647 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
APOA1P02647 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.93□□□□□ -0.18
APOA1P02647 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
APOA1P02647 BX005266.1-201ENST00000473402 457 ntBASIC13.93□□□□□ -0.18
APOA1P02647 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.93□□□□□ -0.18
APOA1P02647 AL136038.3-201ENST00000561909 1096 ntBASIC13.93□□□□□ -0.18
APOA1P02647 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
APOA1P02647 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
APOA1P02647 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOA1P02647 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
APOA1P02647 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOA1P02647 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 IGHV3-47-201ENST00000425060 335 ntBASIC13.92□□□□□ -0.18
APOA1P02647 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.92□□□□□ -0.18
APOA1P02647 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.92□□□□□ -0.18
APOA1P02647 AC063952.2-201ENST00000498792 1227 ntBASIC13.92□□□□□ -0.18
APOA1P02647 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.92□□□□□ -0.18
APOA1P02647 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APOA1P02647 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.92□□□□□ -0.18
APOA1P02647 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOA1P02647 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.92□□□□□ -0.18
APOA1P02647 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms