Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU1-114P-201ENST00000365297 166 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
GGPS1O95749 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.36■□□□□ 0.37
GGPS1O95749 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GGPS1O95749 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.36■□□□□ 0.37
GGPS1O95749 MIR1908-201ENST00000410394 80 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 CNN2P8-201ENST00000421872 913 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.36■□□□□ 0.37
GGPS1O95749 ACTBP11-201ENST00000436287 1126 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 AL355994.2-201ENST00000447882 704 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 AC022494.1-201ENST00000466044 728 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
GGPS1O95749 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.36■□□□□ 0.37
GGPS1O95749 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.36■□□□□ 0.37
GGPS1O95749 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.36■□□□□ 0.37
GGPS1O95749 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.36■□□□□ 0.37
GGPS1O95749 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.36■□□□□ 0.37
GGPS1O95749 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.36■□□□□ 0.37
GGPS1O95749 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.36■□□□□ 0.37
GGPS1O95749 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 AC092127.1-201ENST00000567093 3455 ntBASIC17.36■□□□□ 0.37
GGPS1O95749 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.36■□□□□ 0.37
GGPS1O95749 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GGPS1O95749 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.36■□□□□ 0.37
GGPS1O95749 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GGPS1O95749 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GGPS1O95749 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
GGPS1O95749 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 FAM197Y7-201ENST00000432892 766 ntBASIC17.35■□□□□ 0.37
GGPS1O95749 YBX1P6-201ENST00000442962 1002 ntBASIC17.35■□□□□ 0.37
GGPS1O95749 RN7SL219P-201ENST00000582872 296 ntBASIC17.35■□□□□ 0.37
GGPS1O95749 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.35■□□□□ 0.37
GGPS1O95749 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.35■□□□□ 0.37
GGPS1O95749 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.35■□□□□ 0.37
GGPS1O95749 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 TUBB1P2-201ENST00000422712 1306 ntBASIC17.35■□□□□ 0.37
GGPS1O95749 TUBB1P1-201ENST00000503144 1300 ntBASIC17.35■□□□□ 0.37
GGPS1O95749 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 AC084364.1-201ENST00000551967 1556 ntBASIC17.35■□□□□ 0.37
GGPS1O95749 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 AL138709.1-201ENST00000614840 1693 ntBASIC17.35■□□□□ 0.37
GGPS1O95749 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.35■□□□□ 0.37
GGPS1O95749 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GGPS1O95749 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GGPS1O95749 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 FER1L4-210ENST00000615531 5998 ntBASIC17.34■□□□□ 0.37
GGPS1O95749 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.34■□□□□ 0.37
GGPS1O95749 KLF2P2-201ENST00000416807 1039 ntBASIC17.34■□□□□ 0.37
GGPS1O95749 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.34■□□□□ 0.37
GGPS1O95749 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.34■□□□□ 0.37
GGPS1O95749 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.34■□□□□ 0.37
GGPS1O95749 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GGPS1O95749 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GGPS1O95749 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.34■□□□□ 0.37
GGPS1O95749 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.34■□□□□ 0.37
GGPS1O95749 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.34■□□□□ 0.37
GGPS1O95749 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
GGPS1O95749 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.34■□□□□ 0.37
GGPS1O95749 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.34■□□□□ 0.37
GGPS1O95749 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.34■□□□□ 0.37
GGPS1O95749 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms