Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SPDYE11-202ENST00000450699 704 ntBASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 AC040169.1-201ENST00000565382 521 ntBASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SPDYE9P-201ENST00000570642 692 ntBASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SPDYE10P-202ENST00000612005 668 ntBASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SPDYE8P-202ENST00000612377 668 ntBASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RNF103-CHMP3A0A140T963 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 AL691432.1-201ENST00000596308 1422 ntBASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RNF103-CHMP3A0A140T963 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.05■□□□□ 0
RNF103-CHMP3A0A140T963 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms